Allen Institute
79% goes to programs $0 to raise $100 Strong reserves Growing revenue
Allen Institute is a 501(c)(3) organization based in Seattle, Washington, registered in 2004, with $240,418,148 in FY2023 revenue. CharityIndex grades it A, and it directs about 79% of spending to programs.
615 Westlake Ave N, Seattle, WA, 98109 EIN 91-2155317 Since 2004
Revenue (FY2023)
$240.4M
▲ 30.5% vs prior year
Medical Research median: $217K
Expenses (FY2023)
$220.6M
Net assets
$201.5M
Employees
929
CharityIndex rating
One independent A+ to F grade from four published criteria, each scored separately from IRS filings and combined by weight.
A
AProgram efficiency40% of the rating79% to programs · $0 to raise $100
Measures how much of every dollar spent actually reaches programs, plus what it costs to raise $100 of donations. The worse of the two measures sets the letter (85%+ to programs is an A; under $15 to raise $100 is an A), averaged over the three most recent filings. For Allen Institute: 79% to programs · $0 to raise $100 earns a A on this criterion. See the exact thresholds →
AFinancial health25% of the rating11 mo reserves · +8% margin
Measures whether the organization is built to last: how many months its reserves would cover expenses (3+ months earns an A-range score, but hoarding 5+ years of budget is capped) and whether it runs a surplus or a deficit. For Allen Institute: 11 mo reserves · +8% margin earns a A on this criterion. See the exact thresholds →
A+Governance25% of the rating6 of 6 checks met
Checks how the organization is run, from its own Form 990: an independent board majority, a board of five or more, conflict-of-interest, whistleblower and document-retention policies, and independently audited financials. The share of disclosed checks that pass sets the letter. For Allen Institute: 6 of 6 checks met earns a A+ on this criterion. See the exact thresholds →
ATransparency10% of the rating4 of 5 disclosure signals
Counts five disclosure signals: a recent filing, a mission statement, program descriptions, a listed website, and the full expense breakdown. More disclosure, better letter. For Allen Institute: 4 of 5 disclosure signals earns a A on this criterion. See the exact thresholds →
Show this grade on your website
A live seal — it updates automatically when the grade changes and links donors to this verified profile.
Mission
The mission of the allen institute is to unlock the complexities (see schedule o) of bioscience and advance our knowledge to improve human health. using an open science, multi-scale, team-oriented approach. the allen institute focuses on accelerating foundational research, developing standards and models, and cultivating new ideas to make a broad, transformational impact on science.
Contact & location
- Address
- 615 Westlake Ave N, Seattle, WA, 98109
- City
- Seattle
- State
- Washington
- Category
- Medical Research
- Subcategory
- Medical Specialty Research
- Phone
- …
- Website
- …
Financial trends
Revenue grew from $131.2M (FY2013) to $240.4M (FY2023) across 10 reported years.
Financial snapshot
Financial health & position (FY2023)
Liabilities $149.8MNet assets $201.5M
Operating margin
8.2%
Revenue exceeded expenses in the latest fiscal year.
Total assets
$351.4M
Total liabilities
$149.8M
Net assets
$201.5M
Salaries & benefits
$117.4M
53% of expenses
Board members
10
9 independent
Financials by year
| Fiscal year | Revenue | Expenses | Net assets | Total assets | Form |
|---|---|---|---|---|---|
| 2023 | $240,418,148▲30.5% | $220,607,045▲24.6% | $201,527,421▲12.4% | $351,360,685▲10.6% | 990 |
| 2022 | $184,245,221▼2.2% | $176,998,648▲15.5% | $179,359,466▲3.0% | $317,650,465▲67.1% | 990 |
| 2021 | $188,379,162▲185% | $153,300,344▲14.6% | $174,103,081▲25.0% | $190,069,466▲23.3% | 990 |
| 2020 | $66,144,034▼3.9% | $133,772,178▲1.7% | $139,295,429▼32.7% | $154,207,368▼30.2% | 990 |
| 2019 | $68,821,658▲78.7% | $131,488,780▲15.5% | $206,917,291▼21.3% | $220,850,905▼20.1% | 990 |
| 2018 | $38,514,264▲111% | $113,823,116▲14.3% | $263,037,553▼23.8% | $276,340,900▼23.4% | 990 |
| 2017 | $18,214,027▼93.9% | $99,588,592▲13.6% | $345,014,307▼19.3% | $360,573,543▼17.6% | 990 |
| 2016 | $298,692,956▲166% | $87,646,626▲30.3% | $427,446,160▲97.6% | $437,382,105▲91.1% | 990 |
| 2015 | $112,451,071▼14.3% | $67,280,999▲51.6% | $216,307,913▲31.8% | $228,894,333▲35.0% | 990 |
| 2013 | $131,201,730 | $44,388,618▲5.5% | $164,070,429▲112% | $169,551,403▲108% | 990 |
| 2012 | — | $42,059,598▲22.0% | $77,231,650▲14.9% | $81,468,240▲16.4% | 990 |
| 2011 | — | $34,489,090▲26.7% | $67,208,109▲213% | $69,998,688▲194% | 990 |
| 2010 | — | $27,220,494 | $21,441,568 | $23,822,300 | 990 |
Original Form 990 PDFs (the Form column) are served by ProPublica Nonprofit Explorer, as filed with the IRS. Create a free account to download the CSV report.
Leadership & compensation (FY2023)
Highest-paid: Rui Costa — $1,214,170 (0.55% of total expenses)
| Name | Title | Hours/week | Compensation |
|---|---|---|---|
| Rui Costa | President, Ceo | 40 | $1,214,170 |
| Hongkui Zeng | Executive Vp, Dir. Brain Science | 40 | $574,938 |
| Marjorie Thomas | Vp, Treasurer, Cfo | 40 | $565,538 |
| Margaret Mcclellan | Vice President, Secretary | 40 | $540,071 |
| Karel Svoboda | Executive Vp, Dir. Neural Dynamics | 40 | $528,711 |
| Christof Koch | Meritorious Investigator | 40 | $489,263 |
| Kathryn Richmond | Executive Vp, Dir. Frontiers | 40 | $488,528 |
| Petra Smith | Executive Dir, People & Culture | 40 | $459,933 |
| Christopher Beaudoin | Vice President, Coo | 40 | $426,359 |
| Robert Reid | Senior Investigator | 40 | $415,503 |
| Michael Stryker | Director | 2 | $3,500 |
| Allan Jones | Director | 2 | — |
| Alta Charo | Director | 2 | — |
| Carla Dewberry | Director | 2 | — |
| Joanne Berger-sweeney | Director | 2 | — |
| Jo Lynn Allen | Director | 2 | — |
| Margaret Anderson | Director | 2 | — |
| Phyllis Campbell | Director | 2 | — |
| Stephen Hall | Director | 2 | — |
| Thomas Daniel | Director | 2 | — |
Top vendors & contractors (FY2023)
| Contractor | Services | Paid |
|---|---|---|
| General Datatech LP | Cloud and Data Center Solution Services | $1,011,838 |
| Lewis-burke Associate LLC | Lobbying | $230,000 |
| Arclight Consulting LLC | Oracle Consulting Services | $211,546 |
| Meso Scale Diagnostics | Develop and Manufacture Instruments | $198,082 |
| Alan F Horwitz | Consulting and Advisory Services | $180,000 |
Grants received · $15.3M total
30 grants to Allen Institute totaling $15.3M, reported by foundations on their Schedule I filings — showing the 15 most recent.
| Grantmaker | Purpose | Year | Amount |
|---|---|---|---|
| Silicon Valley Community Foundation | Health | 2024 | $185,000 |
| Howard Hughes Medical Institute | Medical research | 2024 | $10,000 |
| President and Fellows of Harvard College | Research sub-award | 2023 | $5,021,920 |
| Northwestern University | Support of research activities | 2023 | $1,029,402 |
| Cold Spring Harbor Laboratory | Research | 2023 | $233,414 |
| Johns Hopkins University | Sub-award | 2023 | $185,568 |
| Benaroya Research Institute At Virginia Mason | Medical fnd support | 2023 | $172,923 |
| Carnegie Mellon University | Education/research | 2023 | $54,623 |
| President and Fellows of Harvard College | Sponsored research sub-award | 2023 | $40,389 |
| Emory University | Research/subcontract | 2023 | $38,979 |
| Fred Hutchinson Cancer Center | Vaccine and infectious disease research | 2022 | $434,289 |
| Cold Spring Harbor Laboratory | Research | 2022 | $384,318 |
| Seattle Childrens Hospital | Pediatric medical research grant subaward | 2022 | $307,559 |
| Carnegie Mellon University | Education/research subcontracts | 2022 | $198,689 |
| Silicon Valley Community Foundation | Health | 2022 | $26,000 |
Grants made · $13.2M in FY2023
27 grants totaling $13.2M in FY2023 — showing the 15 largest. All grants made by Allen Institute →
| Recipient | Purpose | Amount |
|---|---|---|
| University of Washington | Medical research | $3,215,290 |
| Massachusetts Institute of Technology | Medical research | $1,681,049 |
| Trustees of Columbia University | Medical research | $1,237,676 |
| Icahn School of Medicine At Mount Sinai | Medical research | $883,941 |
| Princeton University | Medical research | $851,964 |
| Baylor College of Medicine | Medical research | $777,203 |
| Rockefeller University | Medical research | $713,348 |
| New York University | Medical research | $496,346 |
| Washington University | Medical research | $474,236 |
| Mass General Brigham Incorporated | Medical research | $448,373 |
| Trustees of Boston University | Medical research | $313,013 |
| Regents of the University of California At San Diego | Medical research | $286,650 |
| The Board of Trustees of the University of Illinois | Medical research | $274,929 |
| Regents of the University of California At Berkeley | Medical research | $230,932 |
| Trustees of the University of Pennsylvania | Medical research | $205,222 |
Similar organizations in Medical Research
- Medical Research
Benaroya Research Institute At Virginia Mason
Seattle, WA
$93.6M
Aannual revenue
Medical Research
Seattle Institute For Biomedical and Clinical Research
Seattle, WA
$26.8M
Bannual revenue
Medical Research
Altius Institute For Biomedical Sciences
Seattle, WA
$25.5M
Dannual revenue
Medical Research
Access To Advanced Health Institute
Seattle, WA
$18.4M
Dannual revenue
- Medical Research
Cancer Research and Biostatistics
Seattle, WA
$11.3M
Bannual revenue
Medical Research
Pacific Northwest Research Institute
Seattle, WA
$5.5M
Dannual revenue
Medical Research
Phenome Health
Seattle, WA
$3.5M
Bannual revenue
Medical Research
Seattle Science Foundation
Seattle, WA
$2.9M
Bannual revenue
- Medical Research
Ibd Horizons
Seattle, WA
$2.3M
C+annual revenue
Medical Research
South Sound Care Foundation
Gig Harbor, WA
$1.5M
Bannual revenue
Compare Allen Institute
Frequently asked questions
- Is Allen Institute a legitimate nonprofit?
- Yes. Allen Institute is a 501(c)(3) organization registered with the U.S. Internal Revenue Service under EIN 91-2155317, based in Seattle, Washington. Donations are tax-deductible.
- What is Allen Institute's EIN?
- Allen Institute's Employer Identification Number (EIN) is 91-2155317.
- How much revenue does Allen Institute report?
- Allen Institute reported $240,418,148 in total revenue on its fiscal year 2023 IRS Form 990 filing.
- How much of Allen Institute's spending goes to programs?
- Allen Institute spends about 79% of its total expenses on programs, based on its latest IRS Form 990.
- What financial grade does Allen Institute have?
- CharityIndex grades Allen Institute A, based on program efficiency and fundraising cost.
- How much does Allen Institute's highest-paid employee make?
- The highest reported compensation on Allen Institute's latest Form 990 is $1,214,170, paid to Rui Costa (President, Ceo).
More nonprofits in Seattle
Explore more
Data for Allen Institute (EIN 91-2155317) comes from the IRS Business Master File and e-filed Form 990 returns, via CharityIndex. Figures reflect what the organization reported to the IRS for each fiscal year.